Audit support
Grant compliance support
Grant compliance support tracks federal, state and foundation grant funds separately from other revenue, codes every expense against the approved budget line by line, and prepares funder reports on the schedule the award requires. Finbryn's team also prepares single-audit documentation for grants expending $1,000,000 or more in federal awards, working alongside your independent audit firm.
Auditor request list
Illustrative client ยท August 2026
USD
- Trial balance and general ledger exportDone
- Bank confirmations and statementsDone
- Receivables and payables listingsDone
- Fixed asset register with additionsIn progress
- Accruals and prepayments supportNext
Illustrative. An example of the document, not a client's figures.
Grant money is not like a normal invoice. It comes with a budget attached, a reporting calendar the funder sets, and an expectation that every dollar can be traced back to the award agreement months or years after it was spent. Mixing grant activity into your general operating revenue, even briefly, turns that tracing exercise into a slow, expensive reconstruction project the first time someone asks for it.
We set up a chart-of-accounts or class structure in QuickBooks Online, Xero, or NetSuite that isolates each award as its own tracked segment from day one, not retrofitted at year end. Expenses get coded against the approved budget line as they happen. When actual spending on a line item starts drifting from what the award approved, that shows up in a monthly view your program staff can act on, rather than surfacing for the first time in an annual report with no runway left to correct it.
For organizations receiving federal funds, the stakes get higher past a specific point. Under 2 CFR 200.501 (the Uniform Guidance), a non-federal entity that expends $1,000,000 or more in federal awards during its fiscal year must undergo a single audit, which examines both the financial statements and specific compliance requirements tied to each major program. That threshold rose from $750,000 to $1,000,000 for fiscal years beginning on or after October 1, 2024, and OMB's 2026 proposed rule has not lowered it back down. We track your cumulative federal spend against that threshold as part of the ongoing engagement, so you know well before year end whether a single audit is coming, rather than finding out from the auditor.
Drawdown requests, reimbursement submissions, and periodic funder financial reports get prepared on the schedule the award requires, with the supporting detail behind each number attached, not a summary figure with nothing underneath it. When a single audit is triggered, we prepare the Schedule of Expenditures of Federal Awards from your tracked grant activity and organize supporting documentation the way a single-audit reviewer expects to see it: award letter, approved budget, expenditure detail, and correspondence, filed together by grant.
We code costs against the approved budget and flag anything that looks like it falls outside the award's stated terms. Whether a specific cost is actually allowable under the grant's guidelines, and any judgment call that requires interpreting the funder's intent, sits with your program staff and, where genuinely unclear, the funder itself. That boundary keeps the accounting accurate and auditable without our team making program decisions we are not positioned to make.
The audit or single-audit examination itself, including the opinion issued on it, comes from a licensed, independent audit firm you engage separately. Our role is to make sure that firm walks into fieldwork with reconciled, budget-coded, well-documented grant records instead of a general ledger that needs to be untangled first.
What is included
Each grant is set up as its own class, project, or location tag depending on your accounting platform, so a report filtered to one award shows only that award's activity, matched against its approved line-item budget. We build a budget-to-actual tracker updated on your normal close cadence, not just at the funder's reporting deadline, so variance gets caught while there is still time to reallocate or ask the funder a question.
Drawdown and reimbursement requests are prepared with the underlying detail, such as timesheets for allocated salary or receipts for direct costs, attached rather than summarized away. For federal awards approaching or past the $1,000,000 single-audit threshold, we also prepare the Schedule of Expenditures of Federal Awards and organize a grant file structured around the award agreement, approved budget, correspondence, and receipts, ready for a single-audit reviewer or program officer to work through without a scramble.
How the process works
We start by reviewing every active award agreement and budget you hold, since the reporting calendar, allowable-cost rules, and indirect-cost treatment can differ meaningfully between a federal grant, a state contract, and a foundation gift, even when the dollar amounts look similar. Each award gets set up as its own tracked segment in your accounting system before any current-period activity is coded to it.
From there, monthly coding runs alongside your regular close, with expenses matched to budget lines as transactions post. Ahead of each funder reporting deadline, we assemble the report from the tracked detail, review it against the award terms with your program staff, and submit or hand it off on the schedule the award requires. If your cumulative federal spend is approaching the single-audit threshold, we flag that early enough to plan for it rather than discover it at year-end close.
Who this is for
Nonprofits, universities, and research organizations managing one or more federal, state, or foundation grants are the core fit, particularly once award count or dollar volume makes manual tracking in a spreadsheet unreliable. Organizations approaching or past $1,000,000 in annual federal awards need this specifically to prepare for the single audit that threshold triggers.
It also fits any organization managing a mix of restricted and unrestricted revenue where the board or funder wants to see net assets released from restriction tracked cleanly, since that presentation depends on the same underlying grant-by-grant tracking discipline this work builds.
Common problems we fix
The most common issue we see is grant revenue and spending recorded into the same general ledger accounts as unrestricted operating activity, with no way to isolate a specific award's balance without manually re-sorting transactions after the fact. Close behind that is a budget that lives only in the original grant proposal PDF, never updated or compared against actual spend until the funder's annual report is due.
We also regularly find indirect costs allocated inconsistently across awards, sometimes at the negotiated rate, sometimes estimated, with no documentation showing which method applied to which grant in which period. Timesheets supporting payroll charged to a grant are another frequent gap, since federal awards specifically require documented time allocation for any staff member whose salary is partly or fully charged to the award.
Software and integrations
Class or project tracking runs inside QuickBooks Online or Xero for smaller organizations, and inside NetSuite's project or fund-accounting module for larger or multi-award nonprofits that need tighter segmentation. Excel remains the standard format for the budget-to-actual tracker and the Schedule of Expenditures of Federal Awards, since that is what most funders and single-audit firms expect to receive and review.
Where a funder requires submission through a specific federal portal, such as for HHS or Department of Education awards, we prepare the underlying figures and reconcile them to your books, while the actual portal submission is handled by your organization or its designated signer.
What it costs
Pricing depends on how many active grants you hold, how many carry federal single-audit exposure under the $1,000,000 federal-expenditure threshold, how many separate funders each carry their own reporting calendar and requirements, and how much cleanup is needed before ongoing tracking starts cleanly. A nonprofit with two grants and clean prior-year records costs less to bring current than one with a dozen active awards, several near the single-audit threshold, and no consistent grant-by-grant tracking in place today. See the pricing note below for how the fee gets confirmed once we understand your grant count and funder mix.
Controls and review
Every grant report and Schedule of Expenditures of Federal Awards goes through a senior review before it reaches your program staff or a funder, checking that expenditure detail ties back to the general ledger and that the budget-to-actual comparison matches the award's approved line items exactly, not an approximation of them.
We keep a running log of any cost flagged as possibly unallowable under an award's terms, along with how it was ultimately resolved, since a single-audit reviewer or program officer frequently asks how the organization handles exactly that kind of judgment call, not just whether the final numbers look clean.
How we work
The process
- 1
Review every active award agreement
Read each grant's budget, reporting calendar, and allowable-cost rules before any activity is coded, since terms differ by funder.
- 2
Set up a tracked segment per grant
Build a class, project, or fund structure in QuickBooks, Xero, or NetSuite so each award's activity can be isolated on demand.
- 3
Code expenses to the approved budget
Match each transaction to its budget line as part of the regular monthly close, not reconstructed later.
- 4
Track cumulative federal spend
Monitor total federal award expenditure against the $1,000,000 single-audit threshold and flag it early if you are approaching it.
- 5
Prepare funder reports and drawdowns
Assemble reimbursement requests and periodic reports with supporting detail attached, on the schedule the award requires.
- 6
Build the Schedule of Expenditures of Federal Awards
Prepare the SEFA from tracked grant activity when a single audit applies, reconciled to the general ledger.
- 7
Organize the grant file for review
File the award letter, approved budget, correspondence, and receipts together, ready for a program officer or single-audit reviewer.
Grant compliance support
Common problems we fix
The problem
How we fix it
- Grant revenue and spending sit in the same accounts as unrestricted operating activitySet up a class or project structure so each award's balance can be pulled on its own without manual re-sorting.
- The approved budget lives only in the original proposal PDF and is never compared to actual spendLoad the approved budget into a monthly tracker so variance is visible before the funder's report is due.
- Indirect costs get allocated inconsistently across awards with no record of which method appliedDocument the negotiated or de minimis rate used per award and apply it consistently, logged in the grant file.
- Payroll charged to a federal award has no supporting timesheet or effort certificationSet up a simple time-allocation record for any staff member partly charged to the grant, matched to the percentage claimed.
- Cumulative federal spend crosses the single-audit threshold without anyone noticing until year endTrack total federal award expenditure monthly and flag it once it approaches $1,000,000, well before the audit is scheduled.
By the numbers
$1,000,000
Source: ecfr.gov/current/title-2/subtitle-A/chapter-II/part-200/subpart-F, September 2026
Pricing
Grant compliance support is priced against how many active grants you hold and whether any carry single-audit exposure, separate from ongoing monthly bookkeeping. Current published tiers and add-ons sit on the /us/pricing rate card, and the exact fee for grant tracking is confirmed in writing once we see your award count and volume.
Grant compliance support
Glossary
- Single audit
- An audit under 2 CFR 200 covering both financial statements and compliance requirements, required when federal awards expended reach $1,000,000 in a fiscal year.
- Schedule of Expenditures of Federal Awards (SEFA)
- A schedule listing all federal award spending by program, required as part of a single audit.
- Allowable cost
- A cost permitted under a specific grant's terms and the funder's guidelines; determined by the funder and program staff, not the bookkeeper.
- Indirect cost rate
- The negotiated or de minimis percentage applied to a grant to recover shared organizational costs not directly billable to the award.
- Drawdown request
- A request to receive grant funds, typically tied to documented expenditures already incurred against the award.
Questions
Frequently asked questions: Grant compliance support
Do you handle multiple grants with different funders and reporting periods at once?
Yes. Each grant is tracked as its own segment with its own reporting calendar, so a quarterly federal report and an annual foundation report never get confused with each other in the books.
Can you prepare the Schedule of Expenditures of Federal Awards for a single audit?
Yes. We prepare the SEFA from your tracked grant activity, reconciled to the general ledger, and organize the supporting documentation the single-audit firm will request.
How do we know if we are close to needing a single audit?
We track cumulative federal award spend against the $1,000,000 threshold set in 2 CFR 200.501 as part of the ongoing engagement, and flag it well before year end if you are approaching it.
What if we are not sure whether a cost is allowable under the grant?
We flag it against the award's stated terms rather than guessing. The final allowability decision sits with your program staff and, where genuinely unclear, the funder.
Do you submit reports directly to the funder's portal?
We prepare the figures and reconcile them to your books. Where a funder requires submission through a specific portal or under a named signer, that submission is handled by your organization or its designated signer.
What does grant compliance support actually include, month to month?
It covers a chart of accounts or class structure that tracks each grant separately, plus expenses coded and matched against the approved budget line by line. Work runs inside QuickBooks Online, Xero, NetSuite or Excel, the file stays under your own subscription, and a senior reviewer checks the output before it reaches you each period.
What access do you need to start?
View or edit access to QuickBooks Online, Xero, NetSuite or Excel is enough to begin. Any additional access needed for a specific deliverable, such as a bank portal or a funder's reporting site, is agreed with you first and set out in your engagement letter.
Do you decide which costs are allowable under the grant?
No. We code costs against the approved budget and flag anything that looks outside its terms; the funder's guidelines and your program staff make the final allowability call.
Can you track multiple grants with different reporting periods?
Yes. Each grant is set up as its own tracked segment, with reporting deadlines managed separately from your regular monthly close.
What if our records for grant compliance support are not up to date?
If your records are behind, we scope a catch-up first so grant compliance support starts from a clean, reconciled base. That catch-up is priced and timed separately from the ongoing engagement, so you always know what each part costs.
Who reviews the work before it reaches us?
Every deliverable under grant compliance support is reviewed by a senior reviewer before it reaches you. You keep access to the underlying file at every stage, so nothing about the work happens somewhere you cannot see it.
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- Audit supportWorking paper preparationSupporting schedules and reconciliations built the way an auditor expects to see them, cross-referenced to the trial balance, so review comments come back with fewer open questions.
Industries
Related guides
- Industry guidesNonprofit Accounting Basics and Form 990, ExplainedHow fund accounting, restricted funds, and functional expenses work for nonprofits, plus which Form 990 you file and when it's due.
- BookkeepingHow to Design a Chart of Accounts (With SaaS and Ecommerce Examples)How to number and structure a chart of accounts, with worked SaaS and ecommerce examples and the mistakes that force a costly rebuild later.
- BookkeepingThe Month-End Close Checklist: Day by Day, Close by Business Day 5A day-by-day month-end close checklist covering reconciliations, accruals, deferred revenue and review, so your books close by business day 5 every month.
Sources
- [1]Pease Bell, OMB's 2026 Single Audit and Uniform Guidance Overhaul, September 2026
- [2]eCFR, 2 CFR Part 200 Subpart F, Audit Requirements, September 2026
- [3]Brymar CPA, The $1 Million Single Audit Threshold for Nonprofits in 2026, September 2026
Next step
Talk to the team that would run your books
A short call covers your setup, your software and what a first month would look like. You get a written scope and price after it.
Need this in writing? Download a one to two page scope sheet for Grant compliance support: what is included, the process, and where pricing lives.
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